09:00 – 09:30 | Registration |
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09:30 – 09:45 | Iain MacLaren & Angelica Vittori Oxford Nanopore Technologies |
Introduction and Welcome |
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09:45 – 10:30 | Iain MacLaren Oxford Nanopore Technologies |
Nanopore sequencing -- from basics to the latest updates |
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10:30 – 11:00 | Coffee break | ||
11:00 – 11:30 | Professor Elijah Miinda Ateka Jomo Kenyatta University of Agriculture and Technologies |
Cassava viruses in Kenya | |
11:30 – 12:00 | Professor Laura Boykin University of Western Australia |
Nanopore sequencing of cassava viruses | |
12:00 – 12:45 | Angelica Vittori Oxford Nanopore Technologies |
Kits, protocols and getting started | |
12:45 – 14:00 | Lunch and live demos |
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14:00 – 15:00 | Iain MacLaren Oxford Nanopore Technologies |
Nanopore applications | |
15:00 – 16:00 | Angelica Vittori Oxford Nanopore Technologies |
Nanopore software | |
16:00 – 17:00 | Networking |
Day 2: Workshop
09:00 – 09:30 | Registration |
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09:30 – 09:45 | Introduction and Welcome |
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09:45 – 10:30 | Planning your experiment 1: input material | ||
10:30 – 11:00 | Coffee break | ||
11:00 – 12:00 | Planning your experiment 2: DNA kits, RNA kits, barcoding options, washing and re-using a flow cell. | ||
12:30 – 12:45 | Live demo flow cell loading | ||
12:30 – 14:00 | Lunch |
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14:00 – 15:15 | Rapid control experiment (wet lab) | ||
15:15 – 16:30 | Software introduction: MinKNOW, Albacore, Epi2Me, Data file structure | ||
16:30 – 17:30 | Networking |